Large language models increasingly rely on synthetic data due to human-written content scarcity, yet recursive training on model-generated outputs leads to model collapse, a degenerative process threatening factual reliability. We define knowledge collapse as a distinct three-stage phenomenon where factual accuracy deteriorates while surface fluency persists, creating "confidently wrong" outputs that pose critical risks in accuracy-dependent domains. Through controlled experiments with recursive synthetic training, we demonstrate that collapse trajectory and timing depend critically on instruction format, distinguishing instruction-following collapse from traditional model collapse through its conditional, prompt-dependent nature. We propose domain-specific synthetic training as a targeted mitigation strategy that achieves substantial improvements in collapse resistance while maintaining computational efficiency. Our evaluation framework combines model-centric indicators with task-centric metrics to detect distinct degradation phases, enabling reproducible assessment of epistemic deterioration across different language models. These findings provide both theoretical insights into collapse dynamics and practical guidance for sustainable AI training in knowledge-intensive applications where accuracy is paramount.

Large language models (LLMs) are increasingly recognized as powerful tools for scientific discovery, particularly in molecular science. A fundamental requirement for these models is the ability to accurately understand molecular structures, commonly encoded in the SMILES representation. However, current LLMs struggle to interpret SMILES, even failing to carry out basic tasks such as counting molecular rings. To address this limitation, we introduce CLEANMOL, a novel framework that formulates SMILES parsing into a suite of clean and deterministic tasks explicitly designed to promote graph-level molecular comprehension. These tasks span from subgraph matching to global graph matching, providing structured supervision aligned with molecular structural properties. We construct a molecular pretraining dataset with adaptive difficulty scoring and pre-train open-source LLMs on these tasks. Our results show that CLEANMOL not only enhances structural comprehension but also achieves the best or competes with the baseline on the Mol-Instructions benchmark.

Language Models (LMs) have shown substantial improvements in handling factual knowledge, yet their capability to consistently represent temporal facts, which are valid only within specific timeframes, remains underexplored. To investigate this, we introduce TimeStress, a novel dataset comprising 521K statements on 2003 of the most popular temporal facts in Wikidata. Each statement contextualizes a fact with correct and incorrect dates across three precisions (Day, Month, Year). This setup allows us to evaluate LMs' ability to discern between correct and incorrect temporal statements based on their probability of being generated. We assess 18 LMs across various architectures using two metrics: the win rate, indicating how often correct dates outperform incorrect ones, and robustness, reflecting consistent performance across all dates. Our findings reveal that while some LMs achieve a win rate exceeding 80\%, robustness remains low, with the best model achieving only 6\%. Furthermore, robust knowledge at one date precision does not reliably transfer to others, highlighting a significant generalization gap. These results underscore the struggle of LMs to maintain a consistent temporal representation, supporting their limitations as reliable sources of temporal knowledge. We provide all data and code for further research.

Instruction tuning has emerged as a promising approach to enhancing large language models in following human instructions. It is shown that increasing the diversity and number of instructions in the training data can consistently enhance generalization performance, which facilitates a recent endeavor to collect various instructions and integrate existing instruction tuning datasets into larger collections. However, different users have their unique ways of expressing instructions, and there often exist variations across different datasets in the instruction styles and formats, i.e., format inconsistency. In this work, we propose a framework named Unified Instruction Tuning (UIT), which calls OpenAI APIs for automatic format transfer among different instruction tuning datasets such as PromptSource, FLAN and CrossFit. With the framework, we (1) demonstrate the necessity of maintaining format consistency in instruction tuning; (2) improve the generalization performance on unseen instructions on T5-LM-xl; (3) provide a novel perplexity-based denoising method to reduce the noise of automatic format transfer to make the UIT framework more practical and a smaller offline model based on GPT-J that achieves comparable format transfer capability to OpenAI APIs to reduce costs in practice. Further analysis regarding variations of targeted formats and other effects is intended.